Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810135.1_cds_XP_016496079.1_10336
CDS Infomation

[gene=LOC107815077] [db_xref=GeneID:107815077] [protein=actin-related protein 5-like isoform X2] [protein_id=XP_016496079.1] [location=join(167297..167339,167623..167732,170047..170156,170242..170332,170399..170830,171025..171152,171337..171682,171773..172273)] [gbkey=CDS]
Sequence

ATGGCTGAGCTTCTTTTTGAGTCATATGGAGTTCCTTCAGTAGCATTTGGTGTAGATGCT
GCATTCAGCTATAAATACAACCAACAGCTTGGAATTTGTAAAGATATTGGTCTTGCAATC
AGCTCAGGATTTACTACAAGTCATGTCATTCCGTTTATTAACGGAGAACCTGTCTATGAA
GCGTGCTGTCGAACTAATGTTGGTGGATACCATGTTACTGATTATCTGAAGCAGCTTCTT
TCACTCAAGCACCCTCATCACATATCAAAGCTTACATGGGAAAAGGTTGAAGAACTGAAG
ATGGAATACTGTTACATAGCCGCAGACTATGCTTCAGAGGTTCAATTATTTCAGAGGGGG
GATAAGGAAGCTGAAGAAAAGACCAGATGTTGGCAGCTTCCTTGGACTCCATCACCAGCC
GATGAGCCTCCATCAGAAGAAGAACTTGCAAGAAAGGCGGCTTTGAAGGAAAAACAAAGT
CAAAGATTGCGTGAGATGGCTGAAGCGAAAAGATCCTCAAAAATAAATGAACTTGAAAAT
GAATTAAAAGGTTTGGAATTCCTCTTAGAGGAGCTCAAGGACACTGAGGATGACCAAATT
GTGTCGTTCCTTGAAAGTAGAGGTTATACTTCTAAACGTGAAGTGGAAGCTGCTTTTGCA
AAAGTTACTCAAACACTTCGGAAGGCCAAGGGTGAGCAGGTTCCTAGTGACGAGAAAGCA
GATGCTTCTGCAGCTGAGAAGTATTATCTCATTGATATACCTGATGAAGAACTTTCAGCA
GAGCAGCTCAAGGAGAAGAGAAGACAAGTGTTCCTGAAGTCCACAACTGAAGCACGGCAG
CGAGCTAAACAAAAGCGTTTGGAGGAGGAGTTAGAAAAGGAGAAGGAAAAGAAACTTGAG
GAACAAAAGCGCCTGGAAAACCCAGAACGCTATATGGAGCAGTTGCGAGCCAAATACAAA
GAGCTGTCGGAAAAACTTGAGCAGCGAAAGCGATTGAAGACAAATGGGAACCATGCAAAT
GGCAATAATAATGTTTCTGGAGGTGTCGGTCGTGGGGAGAGGTTGAATGCTGCCCAAAGA
GAGAGGATGCGCTTGTTAACCACGGCAGCATTTGATCGAGGGAAAGGTGAAGATACTTTT
GGTCAAAGGGATGAAGATTGGCAACTCTACAAGCTAATGAGTAGAGATAATGATGATGAT
GACGGTGATAAGCCAGATCAGGATGAAGCTGAGTTGGCTCGCATCTCCTCTAGGCTTCTG
GAGATCGATCCTTCGTTTTTCCCAGGATCAGAGTCTGGAGCCTCTGCCTCAGAGGTGCCA
CGTTTCCGTCCTCTAACAAAGGAGGATTTTCAAATCATACTTGGGGTTGAAAGATTTAGA
TGTCCTGAAGTTCTATTCAAACCCAACTTAATTGGAATTGACCAGTCAGGGTTGGATGAA
ATGGTTGGAGTGTCTTTGAGAAGATTGCCTACTTGGGGACAAGGCTTGGGGGATAAAATG
ACAACTTCAATACTTATGACTGGCGGGAGTTGTCTCTACCCAGGTATGGCTGAGCGCTTG
GAAGCAGGAATTCGGATGATCAGGCCATGTGGAACTCCTATAAAGGTTCTCAGAGCAACA
GATCCAATTATGGATGCATGGCGAGGTGCTTCAACGTATGCTGCTGCTATGCAATTCCCA
CAACAAACATTCAGTAGAATGGATTATTATGAAAAAGGTGAAGATTGGCTTCGTAGATAT
AAGTTCAGATACAGGATCTAA

Peptide Sequence

PEP ID

XP_016496079.1
PEP Infomation

PREDICTED: actin-related protein 5-like isoform X2 [Nicotiana tabacum]
Sequence

MAELLFESYGVPSVAFGVDAAFSYKYNQQLGICKDIGLAISSGFTTSHVIPFINGEPVYE
ACCRTNVGGYHVTDYLKQLLSLKHPHHISKLTWEKVEELKMEYCYIAADYASEVQLFQRG
DKEAEEKTRCWQLPWTPSPADEPPSEEELARKAALKEKQSQRLREMAEAKRSSKINELEN
ELKGLEFLLEELKDTEDDQIVSFLESRGYTSKREVEAAFAKVTQTLRKAKGEQVPSDEKA
DASAAEKYYLIDIPDEELSAEQLKEKRRQVFLKSTTEARQRAKQKRLEEELEKEKEKKLE
EQKRLENPERYMEQLRAKYKELSEKLEQRKRLKTNGNHANGNNNVSGGVGRGERLNAAQR
ERMRLLTTAAFDRGKGEDTFGQRDEDWQLYKLMSRDNDDDDGDKPDQDEAELARISSRLL
EIDPSFFPGSESGASASEVPRFRPLTKEDFQIILGVERFRCPEVLFKPNLIGIDQSGLDE
MVGVSLRRLPTWGQGLGDKMTTSILMTGGSCLYPGMAERLEAGIRMIRPCGTPIKVLRAT
DPIMDAWRGASTYAAAMQFPQQTFSRMDYYEKGEDWLRRYKFRYRI

Transcript Sequence

Gene sequence data has not been registered.